BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018E07SP1|AL427331
(913 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1710 1654 0.0
>3x_Contig1710
Length = 16151
Score = 1654 bits (834), Expect = 0.0
Identities = 869/874 (99%), Gaps = 5/874 (0%)
Strand = Plus / Minus
Query: 2 caacgttcttactccattccgtcaaaccaccttgaaccatggtaggagacaaagctggca 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7807 caacgttcttactccattccgtcaaaccaccttgaaccatggtaggagacaaagctggca 7748
Query: 62 taccaatgatggtgtatggtgggtaagaagcatacgttctcaattgaagtctggcagcac 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7747 taccaatgatggtgtatggtgggtaagaagcatacgttctcaattgaagtctggcagcac 7688
Query: 122 aagccaagacgctcattcttggagcaactctagaaagtaatgcagacatttttcctagtt 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7687 aagccaagacgctcattcttggagcaactctagaaagtaatgcagacatttttcctagtt 7628
Query: 182 cttttcttaatatatgtacacaaacaattgattcgttcccgtaacttggttaatacaatt 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7627 cttttcttaatatatgtacacaaacaattgattcgttcccgtaacttggttaatacaatt 7568
Query: 242 gaatatcaaatgtaagccgattttatcttctggtacagtcaattcctgtgtccaattcgt 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7567 gaatatcaaatgtaagccgattttatcttctggtacagtcaattcctgtgtccaattcgt 7508
Query: 302 agtgaaatgtaaccttaataaatattgatatctcagttctaaatgaaggaggaaaaggct 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7507 agtgaaatgtaaccttaataaatattgatatctcagttctaaatgaaggaggaaaaggct 7448
Query: 362 tgatgtattatttcaatcttcttctttcaagcgagatcaattaccaacaggtgtaatcag 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7447 tgatgtattatttcaatcttcttctttcaagcgagatcaattaccaacaggtgtaatcag 7388
Query: 422 tgttccaatagtatcgtcaaatgcactagcgaatcacaatcatttttttttctcttgtgc 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7387 tgttccaatagtatcgtcaaatgcactagcgaatcacaatcatttttttttctcttgtgc 7328
Query: 482 aatctaatcgatgttatttacagataaatgttctcccatctaacctttttccttttattt 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7327 aatctaatcgatgttatttacagataaatgttctcccatctaacctttttccttttattt 7268
Query: 542 cttgagaatttcagttttcagaattttcgaaatccaaaatatccacactataatggtgcg 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7267 cttgagaatttcagttttcagaattttcgaaatccaaaatatccacactataatggtgcg 7208
Query: 602 acgggatagaaggtgggatgaacagaaacatgcccgtgatccgctgcaaactgatagctg 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7207 acgggatagaaggtgggatgaacagaaacatgcccgtgatccgctgcaaactgatagctg 7148
Query: 662 ctagaagggtttccgtcgtgatagttataaagctttatataatggtatttctcgagatga 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7147 ctagaagggtttccgtcgtgatagttataaagctttatataatggtatttctcgagatga 7088
Query: 722 tatttatctcaatcccaaacctgctcttgagctgtataaatgctttcacaattgatggag 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7087 tatttatctcaatcccaaacctgctcttgagctgtataaatgctttcacaattgatggag 7028
Query: 782 tagagtaacttaccgattaatatgtggtgtagggag-ttactagtgtcaa-ttttggcta 839
|||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 7027 tagagtaacttaccgattaatatgtggtgtagggagtttactagtgtcaatttttggcta 6968
Query: 840 gtg-cagcgg-ctaaacggtgg-cacaattgtgc 870
||| |||||| ||||||||||| |||||||||||
Sbjct: 6967 gtgccagcggcctaaacggtggccacaattgtgc 6934
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8077
Number of Sequences: 1807
Number of extensions: 8077
Number of successful extensions: 55
Number of sequences better than 1.0e-20: 1
length of query: 913
length of database: 10,358,551
effective HSP length: 16
effective length of query: 897
effective length of database: 10,329,639
effective search space: 9265686183
effective search space used: 9265686183
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)